Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-methylcitrate dehydratase | SAMN05444679_11762 | Not Available | Negative | 4543880 - 4545331 | 53446.2 |
| 2-methylcitrate synthase | SAMN05444679_11763 | Not Available | Negative | 4545342 - 4546499 | 42447.7 |
| acyl-coa hydrolase | SAMN05444679_11764 | Not Available | Negative | 4546496 - 4546909 | 14640.7 |
| hypothetical protein | SAMN05444679_11765 | Not Available | Positive | 4547013 - 4548488 | 54436.4 |
| looped-hinge helix dna binding domain-containing protein, abrb family | SAMN05444679_11766 | Not Available | Positive | 4548518 - 4548775 | 8894.99 |
| predicted nucleic-acid-binding protein, contains pin domain | SAMN05444679_11767 | Not Available | Positive | 4548782 - 4549189 | 14911.0 |
| methionine synthase (b12-independent) | SAMN05444679_11768 | Not Available | Negative | 4549191 - 4551476 | 85042.7 |
| lysr family transcriptional regulator, regulator for mete and meth | SAMN05444679_11769 | Not Available | Positive | 4551580 - 4552506 | 34140.4 |
| cell division protease ftsh | SAMN05444679_11770 | Not Available | Negative | 4552513 - 4554378 | 66094.1 |
| 3-hydroxyisobutyrate dehydrogenase | SAMN05444679_11771 | Not Available | Negative | 4554543 - 4555436 | 29890.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
