Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyltransferase domain-containing protein | SAMN05444679_101438 | Not Available | Negative | 415940 - 416467 | 18533.4 |
| hypothetical protein | SAMN05444679_101439 | Not Available | Negative | 416497 - 416637 | 5124.4 |
| predicted arabinose efflux permease, mfs family | SAMN05444679_101440 | Not Available | Negative | 416649 - 417866 | 43062.8 |
| dna topoisomerase iv subunit b | SAMN05444679_101441 | Not Available | Positive | 418021 - 419997 | 71869.0 |
| transglycosylase slt domain-containing protein | SAMN05444679_101442 | Not Available | Positive | 420046 - 420924 | 31382.0 |
| n-acetylneuraminic acid mutarotase | SAMN05444679_101443 | Not Available | Positive | 420931 - 422037 | 39097.1 |
| dna topoisomerase iv subunit a | SAMN05444679_101444 | Not Available | Positive | 422089 - 424479 | 86118.4 |
| hypothetical protein | SAMN05444679_101445 | Not Available | Positive | 424482 - 424667 | 7062.57 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN05444679_101446 | Not Available | Negative | 424752 - 425846 | 40730.4 |
| patatin-like phospholipase | SAMN05444679_101447 | Not Available | Positive | 425952 - 429506 | 126584.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
