Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| curved dna-binding protein | SAMN05444679_11752 | Not Available | Positive | 4534136 - 4535107 | 35978.4 |
| chaperone modulatory protein cbpm | SAMN05444679_11753 | Not Available | Positive | 4535113 - 4535436 | 11818.2 |
| chemotaxis signal transduction protein | SAMN05444679_11754 | Not Available | Positive | 4535456 - 4538023 | 90093.4 |
| hypothetical protein | SAMN05444679_11755 | Not Available | Positive | 4538109 - 4538834 | 25198.5 |
| dipeptidase, putative | SAMN05444679_11756 | Not Available | Negative | 4538838 - 4540562 | 61951.8 |
| uncharacterized protein, contains gyd domain | SAMN05444679_11757 | Not Available | Positive | 4540808 - 4541134 | 11850.0 |
| tetratricopeptide repeat-containing protein | SAMN05444679_11758 | Not Available | Negative | 4541144 - 4542484 | 48491.2 |
| hypothetical protein | SAMN05444679_11759 | Not Available | Positive | 4542702 - 4543070 | 12673.6 |
| snoal-like domain-containing protein | SAMN05444679_11760 | Not Available | Positive | 4543120 - 4543500 | 14467.9 |
| hypothetical protein | SAMN05444679_11761 | Not Available | Positive | 4543599 - 4543892 | 10338.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
