Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic ring-opening dioxygenase, catalytic subunit, ligb family | SAMN05444679_11742 | Not Available | Negative | 4521025 - 4521849 | 29751.4 |
| transcriptional regulator, lysr family | SAMN05444679_11743 | Not Available | Positive | 4521929 - 4522816 | 32291.2 |
| atp-binding cassette, subfamily b, multidrug efflux pump | SAMN05444679_11744 | Not Available | Positive | 4522933 - 4524825 | 68775.1 |
| protein of unknown function | SAMN05444679_11745 | Not Available | Positive | 4525141 - 4526520 | 49327.3 |
| small gtp-binding protein domain-containing protein | SAMN05444679_11746 | Not Available | Positive | 4526517 - 4527941 | 51321.5 |
| gmp synthase (glutamine-hydrolysing) | SAMN05444679_11747 | Not Available | Positive | 4527938 - 4528765 | 29662.5 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | SAMN05444679_11748 | Not Available | Positive | 4528800 - 4529444 | 22746.9 |
| putative cardiolipin synthase | SAMN05444679_11749 | Not Available | Positive | 4529444 - 4530997 | 56186.1 |
| acyl-homoserine-lactone acylase | SAMN05444679_11750 | Not Available | Positive | 4531100 - 4533484 | 84121.0 |
| probable phosphoglycerate mutase | SAMN05444679_11751 | Not Available | Positive | 4533495 - 4534109 | 21457.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
