Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation elongation factor 2 (ef-2/ef-g) | SAMN05444679_11722 | Not Available | Negative | 4498669 - 4500729 | 74132.9 |
| hypothetical protein | SAMN05444679_11723 | Not Available | Negative | 4500839 - 4501672 | 29264.9 |
| phosphohistidine phosphatase | SAMN05444679_11724 | Not Available | Positive | 4501781 - 4502266 | 17922.5 |
| uncharacterized membrane protein | SAMN05444679_11725 | Not Available | Negative | 4502276 - 4502851 | 20457.8 |
| error-prone dna polymerase | SAMN05444679_11726 | Not Available | Negative | 4502903 - 4506223 | 124033.0 |
| protein imub | SAMN05444679_11727 | Not Available | Negative | 4506216 - 4507529 | 49176.1 |
| protein imua | SAMN05444679_11728 | Not Available | Negative | 4507498 - 4508298 | 28373.4 |
| phage derived protein gp49-like | SAMN05444679_11729 | Not Available | Positive | 4508551 - 4508748 | 7462.98 |
| predicted dna-binding protein, contains xre-type hth domain | SAMN05444679_11730 | Not Available | Positive | 4508745 - 4509083 | 12235.7 |
| aldo/keto reductase | SAMN05444679_11731 | Not Available | Positive | 4509087 - 4509908 | 29769.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
