Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s2 | SAMN05444679_116178 | Not Available | Positive | 4472296 - 4473051 | 27472.3 |
| translation elongation factor ts (ef-ts) | SAMN05444679_116179 | Not Available | Positive | 4473164 - 4474087 | 32539.1 |
| uridylate kinase | SAMN05444679_116180 | Not Available | Positive | 4474181 - 4474903 | 25368.0 |
| ribosome recycling factor | SAMN05444679_116181 | Not Available | Positive | 4474918 - 4475478 | 20606.8 |
| undecaprenyl diphosphate synthase | SAMN05444679_116182 | Not Available | Positive | 4475496 - 4476212 | 26248.3 |
| phosphatidate cytidylyltransferase | SAMN05444679_116183 | Not Available | Positive | 4476217 - 4477062 | 30147.0 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | SAMN05444679_116184 | Not Available | Positive | 4477062 - 4478249 | 41978.8 |
| site-2 protease. metallo peptidase. merops family m50b | SAMN05444679_116185 | Not Available | Positive | 4478273 - 4479643 | 49377.4 |
| hypothetical protein | SAMN05444679_116186 | Not Available | Positive | 4479682 - 4479847 | 5989.27 |
| hypothetical protein | SAMN05444679_1171 | Not Available | Positive | 4479848 - 4479964 | 3890.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
