Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-val | Not Available | Not Available | Positive | 4462003 - 4462079 | Not Available |
| hypothetical protein | SAMN05444679_116169 | Not Available | Positive | 4462259 - 4462627 | 13441.8 |
| polyhydroxyalkanoate synthesis repressor phar | SAMN05444679_116170 | Not Available | Positive | 4462723 - 4463259 | 20235.8 |
| ssu ribosomal protein s12p methylthiotransferase | SAMN05444679_116171 | Not Available | Positive | 4463299 - 4464705 | 50686.3 |
| Trna-leu | Not Available | Not Available | Positive | 4464788 - 4464872 | Not Available |
| ribonuclease r | SAMN05444679_116173 | Not Available | Positive | 4464911 - 4467220 | 85419.8 |
| meso-butanediol dehydrogenase / (s,s)-butanediol dehydrogenase / diacetyl reductase | SAMN05444679_116174 | Not Available | Positive | 4467234 - 4467995 | 26623.0 |
| yjef c-terminal region, hydroxyethylthiazole kinase-related/yjef n-terminal region | SAMN05444679_116175 | Not Available | Negative | 4468002 - 4469450 | 49429.7 |
| d-amino-acid dehydrogenase | SAMN05444679_116176 | Not Available | Negative | 4469470 - 4470726 | 45135.6 |
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05444679_116177 | Not Available | Negative | 4470781 - 4472112 | 46537.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
