Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoserine phosphatase | SAMN05444679_116158 | Not Available | Negative | 4449691 - 4450404 | 25389.0 |
| transcription-repair coupling factor | SAMN05444679_116159 | Not Available | Negative | 4450401 - 4453931 | 131058.0 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SAMN05444679_116160 | Not Available | Positive | 4454034 - 4454747 | 25073.4 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMN05444679_116161 | Not Available | Positive | 4454744 - 4455229 | 16785.3 |
| two-component system, ompr family, osmolarity sensor histidine kinase envz | SAMN05444679_116162 | Not Available | Negative | 4455220 - 4456704 | 54517.8 |
| two-component system, ompr family, phosphate regulon response regulator ompr | SAMN05444679_116163 | Not Available | Negative | 4456718 - 4457449 | 27206.8 |
| hypothetical protein | SAMN05444679_116164 | Not Available | Positive | 4457621 - 4457965 | 12729.2 |
| predicted secreted protein | SAMN05444679_116165 | Not Available | Positive | 4458073 - 4458741 | 23335.8 |
| 3-hydroxybutyrate dehydrogenase | SAMN05444679_116166 | Not Available | Negative | 4458834 - 4459604 | 26954.3 |
| gtp pyrophosphokinase | SAMN05444679_116167 | Not Available | Positive | 4459720 - 4461951 | 81313.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
