Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_101428 | Not Available | Positive | 408796 - 409263 | 16927.4 |
| dutp pyrophosphatase | SAMN05444679_101429 | Not Available | Positive | 409297 - 409710 | 14532.4 |
| glycine zipper 2tm domain-containing protein | SAMN05444679_101430 | Not Available | Positive | 409878 - 410369 | 16763.9 |
| fkbp-type peptidyl-prolyl cis-trans isomerase slyd | SAMN05444679_101431 | Not Available | Negative | 410435 - 410959 | 18737.3 |
| 50s ribosomal protein l16 3-hydroxylase | SAMN05444679_101432 | Not Available | Positive | 410974 - 412113 | 41880.4 |
| hypothetical protein | SAMN05444679_101433 | Not Available | Positive | 412103 - 412609 | 18943.4 |
| hypothetical protein | SAMN05444679_101434 | Not Available | Positive | 412703 - 412975 | 8644.24 |
| phosphoribosyl 1,2-cyclic phosphodiesterase | SAMN05444679_101435 | Not Available | Negative | 413027 - 413803 | 27487.8 |
| beta-barrel assembly machine subunit bamc | SAMN05444679_101436 | Not Available | Negative | 413814 - 414893 | 39522.8 |
| 4-hydroxy-tetrahydrodipicolinate synthase | SAMN05444679_101437 | Not Available | Negative | 415009 - 415899 | 31859.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
