Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| iron complex transport system atp-binding protein | SAMN05444679_116138 | Not Available | Positive | 4427901 - 4428689 | 27975.8 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | SAMN05444679_116139 | Not Available | Positive | 4428710 - 4429279 | 21047.5 |
| adenosylcobinamide-phosphate synthase | SAMN05444679_116140 | Not Available | Positive | 4429289 - 4430245 | 33969.1 |
| histidinol-phosphate aminotransferase | SAMN05444679_116141 | Not Available | Positive | 4430242 - 4431237 | 35176.8 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_116142 | Not Available | Negative | 4431241 - 4432155 | 34033.9 |
| acetyl esterase/lipase | SAMN05444679_116143 | Not Available | Positive | 4432324 - 4433196 | 30440.6 |
| membrane fusion protein, multidrug efflux system | SAMN05444679_116144 | Not Available | Positive | 4433338 - 4434576 | 43561.9 |
| multidrug efflux pump | SAMN05444679_116145 | Not Available | Positive | 4434604 - 4437873 | 116674.0 |
| outer membrane protein, multidrug efflux system | SAMN05444679_116146 | Not Available | Positive | 4437916 - 4439400 | 52945.1 |
| hypothetical protein | SAMN05444679_116147 | Not Available | Negative | 4439403 - 4439636 | 8296.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
