Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, arac family | SAMN05444679_116126 | Not Available | Positive | 4418213 - 4419178 | 35063.9 |
| pgap1-like protein | SAMN05444679_116127 | Not Available | Negative | 4419192 - 4420883 | 62709.2 |
| nucleotide-binding universal stress protein, uspa family | SAMN05444679_116128 | Not Available | Negative | 4421039 - 4421464 | 15089.2 |
| uncharacterized membrane protein yfca | SAMN05444679_116129 | Not Available | Negative | 4421588 - 4422403 | 27719.0 |
| cell division protein zapa | SAMN05444679_116131 | Not Available | Negative | 4422680 - 4423015 | 11587.9 |
| hypothetical protein | SAMN05444679_116132 | Not Available | Negative | 4423015 - 4423239 | 8340.91 |
| vitamin b12 transporter | SAMN05444679_116134 | Not Available | Positive | 4423702 - 4425474 | 64726.4 |
| adenosylcobinamide kinase /adenosylcobinamide-phosphate guanylyltransferase | SAMN05444679_116135 | Not Available | Positive | 4425471 - 4426043 | 20291.9 |
| iron complex transport system substrate-binding protein | SAMN05444679_116136 | Not Available | Positive | 4426040 - 4426900 | 30711.5 |
| iron complex transport system permease protein | SAMN05444679_116137 | Not Available | Positive | 4426897 - 4427901 | 33722.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
