Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rnd family efflux transporter, mfp subunit | SAMN05444679_11696 | Not Available | Positive | 4386711 - 4387877 | 40381.0 |
| multidrug efflux pump subunit acrb | SAMN05444679_11697 | Not Available | Positive | 4387888 - 4391082 | 116456.0 |
| Trna-leu | Not Available | Not Available | Positive | 4391194 - 4391280 | Not Available |
| trigger factor | SAMN05444679_11699 | Not Available | Positive | 4391309 - 4392622 | 48527.8 |
| atp-dependent clp protease proteolytic subunit clpp | SAMN05444679_116100 | Not Available | Positive | 4392717 - 4393325 | 22405.0 |
| atp-dependent clp protease atp-binding subunit clpx | SAMN05444679_116101 | Not Available | Positive | 4393464 - 4394729 | 46241.8 |
| atp-dependent lon protease | SAMN05444679_116102 | Not Available | Positive | 4394853 - 4397294 | 89592.2 |
| Trna-gly | Not Available | Not Available | Positive | 4397349 - 4397424 | Not Available |
| Trna-cys | Not Available | Not Available | Positive | 4397480 - 4397553 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 4397640 - 4397732 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
