Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator containing pas, aaa-type atpase, and dna-binding fis domains | SAMN05444679_11676 | Not Available | Positive | 4366133 - 4367656 | 54917.1 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_11677 | Not Available | Positive | 4367808 - 4369004 | 42972.8 |
| branched-chain amino acid transport system atp-binding protein | SAMN05444679_11678 | Not Available | Positive | 4369009 - 4369773 | 27129.9 |
| branched-chain amino acid transport system atp-binding protein | SAMN05444679_11679 | Not Available | Positive | 4369770 - 4370495 | 26181.0 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444679_11680 | Not Available | Positive | 4370492 - 4371475 | 34617.0 |
| branched-chain amino acid transport system permease protein | SAMN05444679_11681 | Not Available | Positive | 4371525 - 4372589 | 37888.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_11682 | Not Available | Positive | 4372586 - 4373461 | 32081.4 |
| hypothetical protein | SAMN05444679_11683 | Not Available | Positive | 4373508 - 4374014 | 18443.1 |
| ferrochelatase | SAMN05444679_11684 | Not Available | Negative | 4374017 - 4374994 | 36316.6 |
| putative hydrolase of the had superfamily | SAMN05444679_11685 | Not Available | Positive | 4375064 - 4375789 | 26598.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
