Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative tricarboxylic transport membrane protein | SAMN05444679_11666 | Not Available | Positive | 4353864 - 4354823 | 33008.0 |
| putative tricarboxylic transport membrane protein | SAMN05444679_11667 | Not Available | Positive | 4354901 - 4355461 | 19543.9 |
| putative tricarboxylic transport membrane protein | SAMN05444679_11668 | Not Available | Positive | 4355463 - 4356983 | 52657.8 |
| hypothetical protein | SAMN05444679_11669 | Not Available | Positive | 4357129 - 4357461 | 12395.1 |
| dna-binding response regulator, narl/fixj family, contains rec and hth domains | SAMN05444679_11670 | Not Available | Positive | 4357570 - 4358640 | 39509.2 |
| hypothetical protein | SAMN05444679_11671 | Not Available | Positive | 4358782 - 4359735 | 35778.8 |
| hypothetical protein | SAMN05444679_11672 | Not Available | Negative | 4359742 - 4360107 | 12176.4 |
| multidrug efflux pump subunit acrb | SAMN05444679_11673 | Not Available | Negative | 4360147 - 4363272 | 111656.0 |
| rnd family efflux transporter, mfp subunit | SAMN05444679_11674 | Not Available | Negative | 4363269 - 4364420 | 40076.0 |
| efflux transporter, outer membrane factor (omf) lipoprotein, nodt family | SAMN05444679_11675 | Not Available | Negative | 4364417 - 4365895 | 51111.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
