Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| undecaprenyl-diphosphatase | SAMN05444679_11656 | Not Available | Positive | 4345644 - 4346240 | 21082.4 |
| phosphonate transport system atp-binding protein/sn-glycerol 3-phosphate transport system atp-binding protein/atp-binding cassette, subfamily c, cydd | SAMN05444679_11657 | Not Available | Positive | 4346328 - 4346936 | 21906.6 |
| putative abc transport system permease protein | SAMN05444679_11658 | Not Available | Positive | 4346992 - 4347801 | 28353.6 |
| d-amino-acid dehydrogenase | SAMN05444679_11659 | Not Available | Negative | 4347811 - 4349052 | 44411.9 |
| transcriptional regulator, iclr family | SAMN05444679_11660 | Not Available | Positive | 4349249 - 4350079 | 29613.1 |
| hypothetical protein | SAMN05444679_11661 | Not Available | Negative | 4350113 - 4350289 | 6265.59 |
| polyphosphate:nucleotide phosphotransferase, ppk2 family | SAMN05444679_11662 | Not Available | Negative | 4350385 - 4351191 | 30881.1 |
| heat shock protein hsp15 | SAMN05444679_11663 | Not Available | Negative | 4351241 - 4351666 | 15885.8 |
| two-component system, ompr family, sensor histidine kinase tcte | SAMN05444679_11664 | Not Available | Negative | 4351672 - 4353084 | 51392.3 |
| two-component system, ompr family, response regulator tctd | SAMN05444679_11665 | Not Available | Negative | 4353081 - 4353761 | 24952.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
