Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidyl-prolyl cis-trans isomerase b (cyclophilin b) | SAMN05444679_11646 | Not Available | Negative | 4336985 - 4337494 | 18341.7 |
| peptidyl-prolyl cis-trans isomerase a (cyclophilin a) | SAMN05444679_11647 | Not Available | Negative | 4337511 - 4338083 | 20281.3 |
| tetratricopeptide repeat-containing protein | SAMN05444679_11648 | Not Available | Negative | 4338156 - 4338737 | 20779.0 |
| cysteinyl-trna synthetase | SAMN05444679_11649 | Not Available | Positive | 4338898 - 4340304 | 51999.9 |
| dna-3-methyladenine glycosylase ii | SAMN05444679_11650 | Not Available | Positive | 4340322 - 4340972 | 24299.4 |
| acetyl-coa carboxylase carboxyltransferase subunit alpha | SAMN05444679_11651 | Not Available | Positive | 4340988 - 4341968 | 36412.6 |
| trna(ile)-lysidine synthase | SAMN05444679_11652 | Not Available | Positive | 4342004 - 4342954 | 33865.3 |
| aspartate kinase | SAMN05444679_11653 | Not Available | Positive | 4343040 - 4344308 | 45524.6 |
| Trna-ser | Not Available | Not Available | Positive | 4344331 - 4344423 | Not Available |
| hypothetical protein | SAMN05444679_11655 | Not Available | Negative | 4345173 - 4345376 | 7497.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
