Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase or acetyltransferase, isoleucine patch superfamily | SAMN05444679_101418 | Not Available | Positive | 400081 - 400605 | 18084.7 |
| molecular chaperone hsp33 | SAMN05444679_101419 | Not Available | Positive | 400629 - 401627 | 36177.6 |
| hypothetical protein | SAMN05444679_101420 | Not Available | Negative | 401581 - 402576 | 35963.0 |
| hypothetical protein | SAMN05444679_101421 | Not Available | Negative | 402590 - 403054 | 15995.0 |
| cell division protein ftsb | SAMN05444679_101422 | Not Available | Negative | 403060 - 403335 | 10496.9 |
| enolase | SAMN05444679_101423 | Not Available | Negative | 403354 - 404637 | 45615.2 |
| uncharacterized conserved protein, duf1330 family | SAMN05444679_101424 | Not Available | Negative | 404663 - 404950 | 10515.7 |
| 2-dehydro-3-deoxyphosphooctonate aldolase (kdo 8-p synthase) | SAMN05444679_101425 | Not Available | Negative | 404947 - 405804 | 30374.7 |
| ctp synthase | SAMN05444679_101426 | Not Available | Negative | 405801 - 407471 | 61539.8 |
| phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase | SAMN05444679_101427 | Not Available | Positive | 407573 - 408793 | 43284.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
