Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | SAMN05444679_11635 | Not Available | Negative | 4321973 - 4323133 | 41097.3 |
| riboflavin synthase alpha chain | SAMN05444679_11636 | Not Available | Negative | 4323130 - 4323783 | 22479.8 |
| diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase | SAMN05444679_11637 | Not Available | Negative | 4323826 - 4324944 | 39444.4 |
| transcriptional repressor nrdr | SAMN05444679_11638 | Not Available | Negative | 4325374 - 4325817 | 17215.9 |
| serine hydroxymethyltransferase | SAMN05444679_11639 | Not Available | Negative | 4325833 - 4327077 | 44621.6 |
| transglycosylase slt domain-containing protein | SAMN05444679_11641 | Not Available | Negative | 4327285 - 4328118 | 29506.6 |
| protein of unknown function | SAMN05444679_11642 | Not Available | Positive | 4328712 - 4332521 | 133968.0 |
| protein of unknown function | SAMN05444679_11643 | Not Available | Positive | 4332545 - 4335418 | 101946.0 |
| hypothetical protein | SAMN05444679_11644 | Not Available | Negative | 4335431 - 4336216 | 28822.2 |
| udp-2,3-diacylglucosamine hydrolase | SAMN05444679_11645 | Not Available | Negative | 4336216 - 4336977 | 27960.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
