Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_11625 | Not Available | Positive | 4311882 - 4312799 | 33322.9 |
| upf0176 protein | SAMN05444679_11626 | Not Available | Negative | 4312796 - 4313581 | 28627.3 |
| dna polymerase iii, alpha subunit | SAMN05444679_11627 | Not Available | Positive | 4313612 - 4317145 | 130573.0 |
| cell division and transport-associated protein tola | SAMN05444679_11628 | Not Available | Negative | 4317155 - 4318126 | 34443.9 |
| cell division and transport-associated protein tolr | SAMN05444679_11629 | Not Available | Negative | 4318126 - 4318563 | 15505.1 |
| cell division and transport-associated protein tolq | SAMN05444679_11630 | Not Available | Negative | 4318580 - 4319293 | 25809.2 |
| acyl-coa thioester hydrolase | SAMN05444679_11631 | Not Available | Negative | 4319290 - 4319754 | 16969.3 |
| aspartate/methionine/tyrosine aminotransferase | SAMN05444679_11632 | Not Available | Negative | 4319751 - 4320950 | 43797.2 |
| nusb antitermination factor | SAMN05444679_11633 | Not Available | Negative | 4320947 - 4321480 | 19344.9 |
| 6,7-dimethyl-8-ribityllumazine synthase | SAMN05444679_11634 | Not Available | Negative | 4321477 - 4321941 | 16434.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
