Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_1165 | Not Available | Positive | 4292112 - 4292465 | 10892.2 |
| mfs transporter, mhs family, citrate/tricarballylate:h+ symporter | SAMN05444679_1166 | Not Available | Negative | 4292462 - 4293772 | 46723.9 |
| succinyl-coa synthetase, alpha subunit | SAMN05444679_1167 | Not Available | Negative | 4293822 - 4296545 | 96072.5 |
| succinyl-coa synthetase, beta subunit | SAMN05444679_1168 | Not Available | Negative | 4296562 - 4297857 | 47328.2 |
| ribulose-5-phosphate 4-epimerase/fuculose-1-phosphate aldolase | SAMN05444679_1169 | Not Available | Negative | 4297982 - 4298749 | 27983.6 |
| hd domain-containing protein | SAMN05444679_11610 | Not Available | Negative | 4298773 - 4299363 | 22690.8 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444679_11611 | Not Available | Positive | 4299509 - 4300183 | 24279.7 |
| amino acid/amide abc transporter substrate-binding protein, haat family | SAMN05444679_11612 | Not Available | Negative | 4300180 - 4301358 | 40371.6 |
| protein of unknown function | SAMN05444679_11613 | Not Available | Positive | 4301593 - 4303074 | 51620.3 |
| hypothetical protein | SAMN05444679_11614 | Not Available | Positive | 4303085 - 4303363 | 9210.87 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
