Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kef-type potassium/proton antiporter, cpa2 family | SAMN05444679_115203 | Not Available | Positive | 4282559 - 4284409 | 66690.5 |
| hypothetical protein | SAMN05444679_115204 | Not Available | Negative | 4284416 - 4285282 | 32992.3 |
| vanillin synthase /trans-feruloyl-coa hydratase | SAMN05444679_115205 | Not Available | Positive | 4285386 - 4286162 | 27682.3 |
| trans-feruloyl-coa synthase | SAMN05444679_115206 | Not Available | Positive | 4286159 - 4288024 | 66925.2 |
| nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase family | SAMN05444679_115207 | Not Available | Positive | 4288021 - 4288785 | 26073.7 |
| hypothetical protein | SAMN05444679_115208 | Not Available | Positive | 4288812 - 4288973 | 5583.85 |
| hypothetical protein | SAMN05444679_1161 | Not Available | Negative | 4288974 - 4289338 | 10699.9 |
| hypothetical protein | SAMN05444679_1162 | Not Available | Negative | 4289335 - 4290210 | 32326.8 |
| hypothetical protein | SAMN05444679_1163 | Not Available | Positive | 4290736 - 4291071 | 11909.6 |
| hypothetical protein | SAMN05444679_1164 | Not Available | Positive | 4291425 - 4292084 | 26554.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
