Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit 1 | SAMN05444679_115193 | Not Available | Negative | 4273894 - 4275525 | 60448.8 |
| cytochrome c oxidase subunit 2 | SAMN05444679_115194 | Not Available | Negative | 4275575 - 4276753 | 42702.4 |
| uncharacterized membrane protein | SAMN05444679_115195 | Not Available | Negative | 4276817 - 4277338 | 19168.2 |
| malonyl-coa o-methyltransferase | SAMN05444679_115196 | Not Available | Negative | 4277417 - 4278331 | 34049.9 |
| hypothetical protein | SAMN05444679_115197 | Not Available | Negative | 4278339 - 4279091 | 26437.3 |
| trna (cytidine/uridine-2'-o-)-methyltransferase | SAMN05444679_115198 | Not Available | Positive | 4279169 - 4279630 | 17297.7 |
| transcriptional regulator, lysr family | SAMN05444679_115199 | Not Available | Negative | 4279651 - 4280547 | 31763.9 |
| acyl dehydratase | SAMN05444679_115200 | Not Available | Negative | 4280606 - 4281064 | 16934.5 |
| chromosome partitioning protein | SAMN05444679_115201 | Not Available | Negative | 4281224 - 4281844 | 22663.3 |
| kef-type potassium/proton antiporter accessory protein, cpa2 family | SAMN05444679_115202 | Not Available | Positive | 4281915 - 4282556 | 23845.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
