Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein sco1/2 | SAMN05444679_115183 | Not Available | Negative | 4267494 - 4268111 | 22254.9 |
| protoheme ix farnesyltransferase | SAMN05444679_115184 | Not Available | Negative | 4268108 - 4269013 | 32810.0 |
| cytochrome c oxidase assembly protein subunit 15 | SAMN05444679_115185 | Not Available | Negative | 4269010 - 4270197 | 42832.9 |
| hypothetical protein | SAMN05444679_115186 | Not Available | Negative | 4270207 - 4270932 | 26366.8 |
| cytochrome oxidase assembly protein shyy1 | SAMN05444679_115187 | Not Available | Negative | 4270874 - 4271668 | 29390.2 |
| protein of unknown function | SAMN05444679_115188 | Not Available | Positive | 4271696 - 4271926 | 8101.52 |
| cytochrome c oxidase subunit 3 | SAMN05444679_115189 | Not Available | Negative | 4271998 - 4272879 | 33003.9 |
| protein of unknown function | SAMN05444679_115190 | Not Available | Negative | 4272935 - 4273144 | 7602.52 |
| cytochrome c oxidase assembly protein subunit 11 | SAMN05444679_115191 | Not Available | Negative | 4273141 - 4273767 | 22719.4 |
| hypothetical protein | SAMN05444679_115192 | Not Available | Negative | 4273770 - 4273880 | 4204.37 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
