Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| upf0271 protein | SAMN05444679_115173 | Not Available | Negative | 4258043 - 4258783 | 26089.2 |
| biotin-dependent carboxylase uncharacterized domain-containing protein | SAMN05444679_115174 | Not Available | Negative | 4258808 - 4259875 | 37949.7 |
| sensor histidine kinase inhibitor, kipi family | SAMN05444679_115175 | Not Available | Negative | 4259875 - 4260528 | 23244.9 |
| phosphopantetheine adenylyltransferase | SAMN05444679_115176 | Not Available | Negative | 4260525 - 4261028 | 18546.4 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | SAMN05444679_115177 | Not Available | Negative | 4261073 - 4261720 | 22570.2 |
| zinc protease | SAMN05444679_115178 | Not Available | Negative | 4261755 - 4263191 | 50454.1 |
| zinc protease | SAMN05444679_115179 | Not Available | Negative | 4263206 - 4264645 | 52171.4 |
| signal recognition particle-docking protein ftsy | SAMN05444679_115180 | Not Available | Positive | 4264676 - 4265794 | 39087.1 |
| uncharacterized membrane protein ygl010w | SAMN05444679_115181 | Not Available | Positive | 4265856 - 4266317 | 17105.4 |
| rna polymerase, sigma 32 subunit, rpoh | SAMN05444679_115182 | Not Available | Positive | 4266486 - 4267427 | 34563.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
