Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system substrate-binding protein | SAMN05444679_115163 | Not Available | Positive | 4246567 - 4248057 | 53497.2 |
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05444679_115164 | Not Available | Positive | 4248113 - 4249519 | 50110.0 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_115165 | Not Available | Negative | 4249543 - 4250409 | 30773.4 |
| 4-oxalocrotonate tautomerase | SAMN05444679_115166 | Not Available | Positive | 4250518 - 4250916 | 14551.4 |
| hypothetical protein | SAMN05444679_115167 | Not Available | Positive | 4251019 - 4252377 | 49292.6 |
| spw repeat-containing protein | SAMN05444679_115168 | Not Available | Negative | 4252405 - 4252770 | 13263.3 |
| membrane carboxypeptidase (penicillin-binding protein) | SAMN05444679_115169 | Not Available | Positive | 4252883 - 4255933 | 112495.0 |
| probable phosphoglycerate mutase | SAMN05444679_115170 | Not Available | Negative | 4255928 - 4256599 | 25147.0 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_115171 | Not Available | Positive | 4256671 - 4257384 | 26175.0 |
| pyroglutamyl-peptidase | SAMN05444679_115172 | Not Available | Negative | 4257381 - 4258028 | 22862.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
