Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gln | Not Available | Not Available | Positive | 4239363 - 4239439 | Not Available |
| ribose-phosphate pyrophosphokinase | SAMN05444679_115154 | Not Available | Positive | 4239518 - 4240492 | 35223.6 |
| large subunit ribosomal protein l25 | SAMN05444679_115155 | Not Available | Positive | 4240589 - 4241251 | 23814.8 |
| peptidyl-trna hydrolase | SAMN05444679_115156 | Not Available | Positive | 4241330 - 4241962 | 23029.9 |
| hypothetical protein | SAMN05444679_115157 | Not Available | Positive | 4241994 - 4242254 | 9177.7 |
| 4fe-4s binding domain-containing protein | SAMN05444679_115158 | Not Available | Negative | 4242443 - 4242703 | 9657.59 |
| peptide/nickel transport system permease protein | SAMN05444679_115159 | Not Available | Positive | 4242848 - 4243798 | 34121.9 |
| peptide/nickel transport system permease protein | SAMN05444679_115160 | Not Available | Positive | 4243795 - 4244676 | 31001.7 |
| peptide/nickel transport system atp-binding protein | SAMN05444679_115161 | Not Available | Positive | 4244687 - 4245673 | 34980.7 |
| peptide/nickel transport system atp-binding protein | SAMN05444679_115162 | Not Available | Positive | 4245670 - 4246482 | 29367.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
