Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| integrase/recombinase xerd | SAMN05444679_101408 | Not Available | Positive | 391246 - 392148 | 33575.7 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_101409 | Not Available | Positive | 392241 - 393203 | 32915.8 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_101410 | Not Available | Negative | 393246 - 394223 | 33558.8 |
| uncharacterized peroxidase-related enzyme | SAMN05444679_101411 | Not Available | Negative | 394271 - 394876 | 22191.4 |
| n-terminal domain of uncharacterized protein yciw-containing protein | SAMN05444679_101412 | Not Available | Negative | 394873 - 395409 | 18494.1 |
| predicted flavoprotein czco associated with the cation diffusion facilitator czcd | SAMN05444679_101413 | Not Available | Negative | 395406 - 396866 | 53082.5 |
| transcriptional regulator, tetr family | SAMN05444679_101414 | Not Available | Positive | 396947 - 397525 | 20885.0 |
| acetyl-coa acyltransferase | SAMN05444679_101415 | Not Available | Positive | 397612 - 398745 | 38679.7 |
| acyl dehydratase | SAMN05444679_101416 | Not Available | Positive | 398789 - 399241 | 16249.4 |
| uncharacterized conserved protein, contains ferritin-like duf455 domain | SAMN05444679_101417 | Not Available | Negative | 399238 - 400041 | 30017.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
