Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heat-inducible transcription repressor hrca | SAMN05444679_115143 | Not Available | Negative | 4227640 - 4228644 | 36896.5 |
| nad+ kinase | SAMN05444679_115144 | Not Available | Positive | 4228673 - 4229569 | 32069.6 |
| dna repair protein recn (recombination protein n) | SAMN05444679_115145 | Not Available | Positive | 4229571 - 4231253 | 59853.9 |
| upf0042 nucleotide-binding protein | SAMN05444679_115146 | Not Available | Positive | 4231250 - 4232125 | 32699.2 |
| a/g-specific dna-adenine glycosylase | SAMN05444679_115147 | Not Available | Negative | 4232139 - 4233179 | 38786.8 |
| dynamin family protein | SAMN05444679_115148 | Not Available | Negative | 4233196 - 4235157 | 73005.7 |
| dna-(apurinic or apyrimidinic site) lyase | SAMN05444679_115149 | Not Available | Negative | 4235229 - 4236044 | 29717.3 |
| tetratricopeptide repeat-containing protein | SAMN05444679_115150 | Not Available | Positive | 4236126 - 4237949 | 66368.5 |
| outer membrane lipoprotein lolb | SAMN05444679_115151 | Not Available | Positive | 4237946 - 4238437 | 17173.6 |
| 4-diphosphocytidyl-2-c-methyl-d-erythritol kinase | SAMN05444679_115152 | Not Available | Positive | 4238434 - 4239294 | 30303.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
