Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| serine/threonine protein phosphatase prpc | SAMN05444679_115133 | Not Available | Negative | 4220125 - 4221030 | 32522.7 |
| serine/threonine protein kinase | SAMN05444679_115134 | Not Available | Negative | 4221027 - 4222034 | 37722.8 |
| tigr00255 family protein | SAMN05444679_115135 | Not Available | Positive | 4222126 - 4223043 | 33545.4 |
| guanylate kinase | SAMN05444679_115136 | Not Available | Positive | 4223059 - 4223679 | 23089.4 |
| dna-directed rna polymerase subunit omega | SAMN05444679_115137 | Not Available | Positive | 4223710 - 4223913 | 7426.28 |
| gtp pyrophosphokinase | SAMN05444679_115138 | Not Available | Positive | 4224006 - 4226261 | 83359.9 |
| transcription elongation factor greb | SAMN05444679_115139 | Not Available | Negative | 4226258 - 4226827 | 20700.4 |
| Trna-arg | Not Available | Not Available | Positive | 4226884 - 4226960 | Not Available |
| hypothetical protein | SAMN05444679_115141 | Not Available | Positive | 4227214 - 4227492 | 10417.5 |
| Trna-met | Not Available | Not Available | Positive | 4227529 - 4227605 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
