Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s18 acetylase rimi | SAMN05444679_115123 | Not Available | Positive | 4211698 - 4212537 | 29796.8 |
| hypothetical protein | SAMN05444679_115124 | Not Available | Positive | 4212571 - 4213350 | 28475.9 |
| pectic acid lyase | SAMN05444679_115125 | Not Available | Negative | 4213416 - 4215245 | 66990.0 |
| tannase and feruloyl esterase | SAMN05444679_115126 | Not Available | Positive | 4215818 - 4216453 | 22131.7 |
| tannase and feruloyl esterase | SAMN05444679_115127 | Not Available | Positive | 4216458 - 4216694 | 8353.87 |
| Trna-ser | Not Available | Not Available | Positive | 4216714 - 4216801 | Not Available |
| transcriptional regulator, tetr family | SAMN05444679_115129 | Not Available | Negative | 4216841 - 4217503 | 24256.2 |
| oxygen-independent coproporphyrinogen-3 oxidase | SAMN05444679_115130 | Not Available | Negative | 4217514 - 4218773 | 46312.3 |
| xtp/ditp diphosphohydrolase | SAMN05444679_115131 | Not Available | Negative | 4218770 - 4219369 | 21191.4 |
| rnase ph | SAMN05444679_115132 | Not Available | Negative | 4219366 - 4220097 | 25738.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
