Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative addiction module antidote | SAMN05444679_115113 | Not Available | Negative | 4201608 - 4201832 | 8337.17 |
| urease accessory protein | SAMN05444679_115114 | Not Available | Positive | 4201908 - 4202486 | 20513.4 |
| urease accessory protein | SAMN05444679_115115 | Not Available | Positive | 4202486 - 4203175 | 24434.9 |
| urease accessory protein | SAMN05444679_115116 | Not Available | Positive | 4203182 - 4203832 | 23388.4 |
| hypothetical protein | SAMN05444679_115117 | Not Available | Positive | 4203984 - 4204253 | 9706.13 |
| aspartate racemase | SAMN05444679_115118 | Not Available | Positive | 4204295 - 4204987 | 24930.3 |
| geranyl-coa carboxylase alpha subunit | SAMN05444679_115119 | Not Available | Negative | 4204989 - 4206953 | 69685.0 |
| geranyl-coa carboxylase beta subunit | SAMN05444679_115120 | Not Available | Negative | 4206963 - 4208582 | 58195.0 |
| acyl-coa dehydrogenase | SAMN05444679_115121 | Not Available | Negative | 4208601 - 4209776 | 42736.5 |
| protein of unknown function | SAMN05444679_115122 | Not Available | Positive | 4209907 - 4211697 | 63085.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
