Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_115103 | Not Available | Positive | 4191125 - 4191730 | 22162.7 |
| hypothetical protein | SAMN05444679_115104 | Not Available | Negative | 4191706 - 4192830 | 40960.1 |
| hypothetical protein | SAMN05444679_115105 | Not Available | Negative | 4192872 - 4193540 | 23757.2 |
| two component transcriptional regulator, luxr family | SAMN05444679_115106 | Not Available | Negative | 4193581 - 4194594 | 36564.1 |
| signal transduction histidine kinase | SAMN05444679_115107 | Not Available | Negative | 4194591 - 4198124 | 127829.0 |
| urease subunit gamma | SAMN05444679_115108 | Not Available | Positive | 4198179 - 4198481 | 10819.3 |
| urease accessory protein | SAMN05444679_115109 | Not Available | Positive | 4198501 - 4199097 | 20112.4 |
| urease subunit beta | SAMN05444679_115110 | Not Available | Positive | 4199186 - 4199491 | 11034.2 |
| urease. metallo peptidase. merops family m38 | SAMN05444679_115111 | Not Available | Positive | 4199494 - 4201212 | 60703.8 |
| death on curing protein | SAMN05444679_115112 | Not Available | Negative | 4201219 - 4201611 | 14048.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
