Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system permease protein | SAMN05444679_11593 | Not Available | Negative | 4180789 - 4181613 | 29499.2 |
| peptide/nickel transport system permease protein | SAMN05444679_11594 | Not Available | Negative | 4181632 - 4182573 | 33272.9 |
| peptide/nickel transport system substrate-binding protein | SAMN05444679_11595 | Not Available | Negative | 4182662 - 4184206 | 56264.7 |
| reactive intermediate/imine deaminase | SAMN05444679_11596 | Not Available | Positive | 4184361 - 4184747 | 13800.5 |
| atp-dependent clp protease, protease subunit | SAMN05444679_11597 | Not Available | Negative | 4184764 - 4185354 | 21416.6 |
| lipoprotein-releasing system atp-binding protein | SAMN05444679_11598 | Not Available | Negative | 4185425 - 4186186 | 26911.5 |
| lipoprotein-releasing system permease protein | SAMN05444679_11599 | Not Available | Negative | 4186179 - 4187435 | 45350.9 |
| hypothetical protein | SAMN05444679_115100 | Not Available | Positive | 4187558 - 4188520 | 34118.3 |
| exonuclease recj | SAMN05444679_115101 | Not Available | Positive | 4188520 - 4190229 | 60943.6 |
| hypothetical protein | SAMN05444679_115102 | Not Available | Positive | 4190232 - 4191113 | 31963.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
