Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-deoxy-d-gluconate 3-dehydrogenase | SAMN05444679_11583 | Not Available | Positive | 4170518 - 4171276 | 25987.2 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_11584 | Not Available | Negative | 4171304 - 4172272 | 36492.4 |
| pimeloyl-acp methyl ester carboxylesterase | SAMN05444679_11585 | Not Available | Positive | 4172474 - 4173313 | 30680.9 |
| hypothetical protein | SAMN05444679_11586 | Not Available | Positive | 4173349 - 4173708 | 12633.2 |
| abc-type branched-chain amino acid transport system, substrate-binding protein | SAMN05444679_11587 | Not Available | Positive | 4173826 - 4174962 | 39354.3 |
| dihydroorotase | SAMN05444679_11588 | Not Available | Negative | 4174988 - 4176457 | 53024.6 |
| transcriptional regulator, rpir family | SAMN05444679_11589 | Not Available | Negative | 4176450 - 4177361 | 32129.7 |
| d-serine dehydratase | SAMN05444679_11590 | Not Available | Negative | 4177361 - 4178659 | 47540.9 |
| peptide/nickel transport system atp-binding protein | SAMN05444679_11591 | Not Available | Negative | 4178656 - 4179633 | 35386.1 |
| peptide/nickel transport system atp-binding protein | SAMN05444679_11592 | Not Available | Negative | 4179755 - 4180789 | 37128.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
