Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tripartite tricarboxylate transporter tctb family protein | SAMN05444679_11573 | Not Available | Negative | 4161264 - 4161752 | 17038.7 |
| general secretion pathway protein e | SAMN05444679_11574 | Not Available | Negative | 4161871 - 4163658 | 65804.8 |
| hypothetical protein | SAMN05444679_11575 | Not Available | Negative | 4163661 - 4164422 | 28172.8 |
| g/u mismatch-specific uracil-dna glycosylase | SAMN05444679_11576 | Not Available | Negative | 4164422 - 4164943 | 19049.6 |
| hypothetical protein | SAMN05444679_11577 | Not Available | Negative | 4165008 - 4165382 | 12471.1 |
| tatd dnase family protein | SAMN05444679_11578 | Not Available | Negative | 4165507 - 4166367 | 30835.0 |
| trypsin-like peptidase domain-containing protein | SAMN05444679_11579 | Not Available | Positive | 4166458 - 4167438 | 33820.4 |
| moxr-like atpase | SAMN05444679_11580 | Not Available | Positive | 4167473 - 4168489 | 37064.0 |
| protein of unknown function duf58 | SAMN05444679_11581 | Not Available | Positive | 4168470 - 4169465 | 37383.9 |
| ca-activated chloride channel family protein | SAMN05444679_11582 | Not Available | Positive | 4169462 - 4170505 | 37574.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
