Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphatidylserine decarboxylase | SAMN05444679_11563 | Not Available | Positive | 4149520 - 4150386 | 32616.7 |
| dna-binding transcriptional regulator, lysr family | SAMN05444679_11564 | Not Available | Negative | 4150378 - 4151259 | 31671.0 |
| aspartyl-trna(asn)/glutamyl-trna(gln) amidotransferase subunit a | SAMN05444679_11565 | Not Available | Positive | 4151379 - 4152791 | 50190.1 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_11566 | Not Available | Positive | 4152851 - 4153834 | 34638.9 |
| drug resistance transporter, emrb/qaca subfamily | SAMN05444679_11567 | Not Available | Positive | 4153836 - 4155299 | 49297.6 |
| 3-oxoacyl-[acyl-carrier protein] reductase | SAMN05444679_11568 | Not Available | Negative | 4155322 - 4156113 | 27027.6 |
| eama domain-containing membrane protein rard | SAMN05444679_11569 | Not Available | Negative | 4156133 - 4157056 | 32653.2 |
| gamma-glutamyltranspeptidase / glutathione hydrolase | SAMN05444679_11570 | Not Available | Negative | 4157062 - 4158675 | 57587.7 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_11571 | Not Available | Negative | 4158679 - 4159650 | 34070.5 |
| tcta family transporter | SAMN05444679_11572 | Not Available | Negative | 4159736 - 4161250 | 53064.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
