Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator, laci family | SAMN05444679_11553 | Not Available | Positive | 4140258 - 4141253 | 34701.9 |
| putative spermidine/putrescine transport system substrate-binding protein | SAMN05444679_11554 | Not Available | Positive | 4141286 - 4142296 | 36333.6 |
| putative spermidine/putrescine transport system permease protein | SAMN05444679_11555 | Not Available | Positive | 4142344 - 4143099 | 26914.4 |
| putative spermidine/putrescine transport system permease protein | SAMN05444679_11556 | Not Available | Positive | 4143107 - 4143904 | 28833.0 |
| putative spermidine/putrescine transport system atp-binding protein | SAMN05444679_11557 | Not Available | Positive | 4143894 - 4144952 | 38306.5 |
| 3',5'-cyclic amp phosphodiesterase cpda | SAMN05444679_11558 | Not Available | Positive | 4144949 - 4145770 | 30090.2 |
| phosphate:na+ symporter | SAMN05444679_11559 | Not Available | Positive | 4145808 - 4147466 | 59363.4 |
| nadph2:quinone reductase | SAMN05444679_11560 | Not Available | Negative | 4147470 - 4148453 | 34430.8 |
| hypothetical protein | SAMN05444679_11561 | Not Available | Positive | 4148550 - 4149026 | 16451.8 |
| hypothetical protein | SAMN05444679_11562 | Not Available | Positive | 4149053 - 4149523 | 16941.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
