Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna mismatch repair protein mutl | SAMN05444679_101398 | Not Available | Negative | 381193 - 383022 | 65829.3 |
| membrane-associated protein | SAMN05444679_101399 | Not Available | Positive | 383073 - 383723 | 24176.1 |
| osmotically inducible lipoprotein osmb | SAMN05444679_101400 | Not Available | Negative | 383779 - 384057 | 9239.83 |
| nucleobase:cation symporter-1, ncs1 family | SAMN05444679_101401 | Not Available | Positive | 384269 - 385729 | 52220.8 |
| n-acetylmuramoyl-l-alanine amidase | SAMN05444679_101402 | Not Available | Negative | 385745 - 387193 | 51183.6 |
| trna threonylcarbamoyladenosine biosynthesis protein tsae | SAMN05444679_101403 | Not Available | Negative | 387190 - 387690 | 17958.2 |
| epoxyqueuosine reductase | SAMN05444679_101404 | Not Available | Positive | 387787 - 388746 | 35680.7 |
| hypothetical protein | SAMN05444679_101405 | Not Available | Negative | 388733 - 389161 | 15090.0 |
| hypothetical protein | SAMN05444679_101406 | Not Available | Negative | 389192 - 390097 | 31690.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_101407 | Not Available | Positive | 390203 - 391177 | 34254.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
