Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein of unknown function | SAMN05444679_11543 | Not Available | Positive | 4129763 - 4130008 | 9133.03 |
| peptidase inhibitor i78 family protein | SAMN05444679_11544 | Not Available | Negative | 4130028 - 4130414 | 13049.7 |
| phosphoribosylglycinamide formyltransferase-1 | SAMN05444679_11545 | Not Available | Negative | 4130401 - 4130985 | 20544.9 |
| hypothetical protein | SAMN05444679_11546 | Not Available | Positive | 4131129 - 4132310 | 43916.6 |
| hypothetical protein | SAMN05444679_11547 | Not Available | Positive | 4132335 - 4133450 | 40080.8 |
| lipase (class 2) | SAMN05444679_11548 | Not Available | Positive | 4133537 - 4134916 | 49076.9 |
| hnh endonuclease | SAMN05444679_11549 | Not Available | Negative | 4134938 - 4135495 | 20883.1 |
| riboflavin kinase / fmn adenylyltransferase | SAMN05444679_11550 | Not Available | Positive | 4135565 - 4136698 | 41252.8 |
| isoleucyl-trna synthetase | SAMN05444679_11551 | Not Available | Positive | 4136814 - 4139651 | 105557.0 |
| signal peptidase ii aspartic peptidase. merops family a08 | SAMN05444679_11552 | Not Available | Positive | 4139651 - 4140151 | 18293.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
