Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative atpase | SAMN05444679_11533 | Not Available | Negative | 4118260 - 4119552 | 47755.1 |
| outer membrane lipoprotein carrier protein | SAMN05444679_11534 | Not Available | Negative | 4119572 - 4120210 | 22748.2 |
| dna segregation atpase ftsk/spoiiie, s-dna-t family | SAMN05444679_11535 | Not Available | Negative | 4120225 - 4122612 | 86855.6 |
| camp-binding domain of crp or a regulatory subunit of camp-dependent protein kinases | SAMN05444679_11536 | Not Available | Negative | 4122743 - 4123417 | 24916.4 |
| thioredoxin reductase (nadph) | SAMN05444679_11537 | Not Available | Positive | 4123582 - 4124544 | 34451.0 |
| lsu ribosomal protein l28p | SAMN05444679_11538 | Not Available | Positive | 4124725 - 4124958 | 8779.65 |
| lsu ribosomal protein l33p | SAMN05444679_11539 | Not Available | Positive | 4124970 - 4125143 | 6547.1 |
| stearoyl-coa desaturase (delta-9 desaturase) | SAMN05444679_11540 | Not Available | Negative | 4125251 - 4126465 | 46066.7 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN05444679_11541 | Not Available | Negative | 4126597 - 4127868 | 46354.8 |
| zn-dependent protease with chaperone function | SAMN05444679_11542 | Not Available | Negative | 4127880 - 4129736 | 69272.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
