Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptide/nickel transport system atp-binding protein/dipeptide transport system atp-binding protein | SAMN05444679_11523 | Not Available | Negative | 4107995 - 4108963 | 34329.0 |
| peptide/nickel transport system permease protein/glutathione transport system permease protein | SAMN05444679_11524 | Not Available | Negative | 4108963 - 4109865 | 31471.6 |
| peptide/nickel transport system permease protein | SAMN05444679_11525 | Not Available | Negative | 4109855 - 4110847 | 35938.6 |
| peptide/nickel transport system substrate-binding protein | SAMN05444679_11526 | Not Available | Negative | 4110855 - 4112480 | 58524.4 |
| transcriptional regulator, gntr family | SAMN05444679_11527 | Not Available | Negative | 4112536 - 4113258 | 26829.6 |
| tripartite-type tricarboxylate transporter, receptor component tctc | SAMN05444679_11528 | Not Available | Positive | 4113370 - 4114374 | 34637.9 |
| branched-chain amino acid transport system atp-binding protein | SAMN05444679_11529 | Not Available | Negative | 4114377 - 4115093 | 25525.6 |
| amino acid/amide abc transporter atp-binding protein 1, haat family | SAMN05444679_11530 | Not Available | Negative | 4115095 - 4115865 | 27931.9 |
| amino acid/amide abc transporter membrane protein 2, haat family | SAMN05444679_11531 | Not Available | Negative | 4115883 - 4117070 | 41895.6 |
| amino acid/amide abc transporter membrane protein 1, haat family | SAMN05444679_11532 | Not Available | Negative | 4117084 - 4118013 | 32526.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
