Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_11513 | Not Available | Positive | 4099238 - 4099573 | 12352.5 |
| pxpv repeat-containing protein | SAMN05444679_11514 | Not Available | Negative | 4099747 - 4100112 | 13257.5 |
| hemoglobin | SAMN05444679_11515 | Not Available | Negative | 4100235 - 4100705 | 17274.5 |
| regulatory protein, luxr family | SAMN05444679_11516 | Not Available | Negative | 4100725 - 4101090 | 12639.2 |
| serine protease, s1-c subfamily, contains c-terminal pdz domain | SAMN05444679_11517 | Not Available | Negative | 4101105 - 4101989 | 30342.8 |
| transporter, cpa2 family | SAMN05444679_11518 | Not Available | Negative | 4102064 - 4103317 | 44039.4 |
| nucleoside-diphosphate-sugar epimerase | SAMN05444679_11519 | Not Available | Negative | 4103337 - 4104260 | 33550.7 |
| cdp-4-dehydro-6-deoxyglucose reductase | SAMN05444679_11520 | Not Available | Positive | 4104300 - 4105364 | 38914.5 |
| gamma-glutamyltransferase 2. threonine peptidase. merops family t03 | SAMN05444679_11521 | Not Available | Negative | 4105376 - 4106986 | 56815.8 |
| peptide/nickel transport system atp-binding protein | SAMN05444679_11522 | Not Available | Negative | 4107009 - 4107980 | 35233.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
