Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| prolyl 4-hydroxylase | SAMN05444679_1153 | Not Available | Negative | 4089635 - 4090480 | 30666.5 |
| hypothetical protein | SAMN05444679_1154 | Not Available | Negative | 4090477 - 4091262 | 29331.4 |
| glyoxylase, beta-lactamase superfamily ii | SAMN05444679_1155 | Not Available | Positive | 4091349 - 4092326 | 34640.3 |
| valyl-trna synthetase | SAMN05444679_1156 | Not Available | Positive | 4092417 - 4095287 | 107428.0 |
| utp--glucose-1-phosphate uridylyltransferase | SAMN05444679_1157 | Not Available | Positive | 4095381 - 4096271 | 32310.2 |
| hypothetical protein | SAMN05444679_1158 | Not Available | Negative | 4096252 - 4097367 | 40385.9 |
| tusa-related sulfurtransferase | SAMN05444679_1159 | Not Available | Negative | 4097378 - 4097605 | 8463.23 |
| nudix n-terminal | SAMN05444679_11510 | Not Available | Negative | 4097647 - 4098189 | 20121.0 |
| cysteine synthase b | SAMN05444679_11511 | Not Available | Negative | 4098197 - 4099099 | 32621.2 |
| Trna-leu | Not Available | Not Available | Positive | 4099141 - 4099225 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
