Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_114177 | Not Available | Negative | 4054519 - 4055781 | 44780.0 |
| atp-dependent helicase/nuclease subunit a | SAMN05444679_114178 | Not Available | Negative | 4055778 - 4059032 | 118108.0 |
| atp-dependent helicase/nuclease subunit b | SAMN05444679_114179 | Not Available | Negative | 4059029 - 4061578 | 91392.4 |
| thioredoxin | SAMN05444679_114180 | Not Available | Positive | 4061707 - 4062039 | 12074.7 |
| transcription termination factor rho | SAMN05444679_114181 | Not Available | Positive | 4062226 - 4063491 | 47607.1 |
| predicted dehydrogenase | SAMN05444679_114182 | Not Available | Negative | 4063498 - 4064559 | 37778.1 |
| large subunit ribosomal protein l31 | SAMN05444679_114183 | Not Available | Positive | 4064704 - 4064970 | 9910.71 |
| 4-amino-4-deoxy-l-arabinose transferase | SAMN05444679_114184 | Not Available | Positive | 4065049 - 4066776 | 62792.4 |
| multidrug resistance protein, mate family | SAMN05444679_114185 | Not Available | Positive | 4066791 - 4068113 | 47402.6 |
| multi-sensor signal transduction histidine kinase | SAMN05444679_114186 | Not Available | Negative | 4068097 - 4069410 | 48131.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
