Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane-bound lytic murein transglycosylase d | SAMN05444679_114166 | Not Available | Positive | 4045098 - 4046684 | 57170.4 |
| nitt/taut family transport system permease protein | SAMN05444679_114167 | Not Available | Negative | 4046686 - 4047519 | 30335.6 |
| nitt/taut family transport system atp-binding protein | SAMN05444679_114168 | Not Available | Negative | 4047520 - 4048416 | 32351.9 |
| nitt/taut family transport system substrate-binding protein | SAMN05444679_114169 | Not Available | Negative | 4048467 - 4049573 | 38838.1 |
| uncharacterized conserved protein, mapeg superfamily | SAMN05444679_114170 | Not Available | Negative | 4049616 - 4050008 | 14087.3 |
| dna replication and repair protein recr | SAMN05444679_114171 | Not Available | Negative | 4050005 - 4050595 | 21218.5 |
| hypothetical protein | SAMN05444679_114172 | Not Available | Negative | 4050602 - 4050934 | 11831.5 |
| dna polymerase-3 subunit gamma/tau | SAMN05444679_114173 | Not Available | Negative | 4050974 - 4052779 | 64459.4 |
| astacin (peptidase family m12a) | SAMN05444679_114174 | Not Available | Positive | 4052895 - 4054013 | 40961.1 |
| hypothetical protein | SAMN05444679_114176 | Not Available | Negative | 4054177 - 4054458 | 10364.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
