Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| predicted arabinose efflux permease, mfs family | SAMN05444679_101388 | Not Available | Negative | 369355 - 370605 | 42815.9 |
| hypothetical protein | SAMN05444679_101389 | Not Available | Positive | 370776 - 372710 | 69331.4 |
| asp-trnaasn/glu-trnagln amidotransferase a subunit | SAMN05444679_101390 | Not Available | Negative | 372712 - 373992 | 43734.9 |
| predicted homoserine dehydrogenase, contains c-terminal saf domain | SAMN05444679_101391 | Not Available | Negative | 373992 - 375350 | 48611.0 |
| ectoine hydroxylase | SAMN05444679_101392 | Not Available | Negative | 375468 - 376373 | 33965.3 |
| transcriptional regulator, gntr family | SAMN05444679_101393 | Not Available | Negative | 376370 - 377065 | 25008.0 |
| putative abc transport system atp-binding protein | SAMN05444679_101394 | Not Available | Negative | 377147 - 377794 | 22603.5 |
| trna dimethylallyltransferase | SAMN05444679_101395 | Not Available | Negative | 377791 - 378798 | 35898.2 |
| mfs transporter, dha1 family, bicyclomycin/chloramphenicol resistance protein | SAMN05444679_101396 | Not Available | Negative | 378788 - 379978 | 41311.8 |
| hypothetical protein | SAMN05444679_101397 | Not Available | Negative | 380079 - 381032 | 34065.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
