Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_114146 | Not Available | Negative | 4026743 - 4027312 | 21077.2 |
| hypothetical protein | SAMN05444679_114147 | Not Available | Negative | 4027478 - 4027726 | 8769.68 |
| hypothetical protein | SAMN05444679_114148 | Not Available | Negative | 4027713 - 4028066 | 12516.8 |
| hypothetical protein | SAMN05444679_114149 | Not Available | Negative | 4028095 - 4028976 | 33214.6 |
| 3-oxoacyl-[acyl-carrier-protein] synthase-3 | SAMN05444679_114150 | Not Available | Negative | 4028973 - 4030886 | 69822.9 |
| fatty acid desaturase | SAMN05444679_114151 | Not Available | Negative | 4030890 - 4031807 | 35405.9 |
| sterol desaturase/sphingolipid hydroxylase, fatty acid hydroxylase superfamily | SAMN05444679_114152 | Not Available | Negative | 4031791 - 4032531 | 28214.1 |
| putative cardiolipin synthase | SAMN05444679_114153 | Not Available | Negative | 4032579 - 4034153 | 57602.7 |
| peroxiredoxin | SAMN05444679_114154 | Not Available | Positive | 4034270 - 4034824 | 19598.4 |
| aldehyde dehydrogenase (nad+) | SAMN05444679_114155 | Not Available | Positive | 4034872 - 4036305 | 51328.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
