Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-isopropylmalate synthase | SAMN05444679_114126 | Not Available | Negative | 4005642 - 4007180 | 55209.4 |
| 2-isopropylmalate synthase | SAMN05444679_114127 | Not Available | Negative | 4007198 - 4008901 | 62845.8 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | SAMN05444679_114128 | Not Available | Negative | 4009082 - 4009906 | 30092.7 |
| ketol-acid reductoisomerase | SAMN05444679_114129 | Not Available | Negative | 4009996 - 4011012 | 36708.1 |
| acetolactate synthase, small subunit | SAMN05444679_114130 | Not Available | Negative | 4011060 - 4011551 | 18015.9 |
| acetolactate synthase, large subunit | SAMN05444679_114131 | Not Available | Negative | 4011680 - 4013455 | 65201.8 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN05444679_114132 | Not Available | Positive | 4013610 - 4014308 | 26725.7 |
| protein of unknown function | SAMN05444679_114133 | Not Available | Positive | 4014305 - 4014730 | 15108.1 |
| protein of unknown function | SAMN05444679_114134 | Not Available | Positive | 4014744 - 4015556 | 29014.9 |
| uncharacterized membrane protein yckc, rdd family | SAMN05444679_114135 | Not Available | Positive | 4015569 - 4016138 | 21416.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
