Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN05444679_114106 | Not Available | Positive | 3983933 - 3984169 | 8487.41 |
| sorbitol-binding protein /mannitol-binding protein | SAMN05444679_114107 | Not Available | Positive | 3984340 - 3985647 | 47498.0 |
| sorbitol abc transporter membrane protein /mannitol abc transporter membrane protein | SAMN05444679_114108 | Not Available | Positive | 3985793 - 3986623 | 30586.3 |
| sorbitol abc transporter membrane protein /mannitol abc transporter membrane protein | SAMN05444679_114109 | Not Available | Positive | 3986634 - 3987455 | 29867.2 |
| sorbitol abc transporter atp-binding protein /mannitol abc transporter atp-binding protein | SAMN05444679_114110 | Not Available | Positive | 3987472 - 3988503 | 37326.3 |
| d-arabinitol 4-dehydrogenase | SAMN05444679_114111 | Not Available | Positive | 3988517 - 3989935 | 51869.7 |
| d-sorbitol dehydrogenase (acceptor) | SAMN05444679_114112 | Not Available | Positive | 3989932 - 3990720 | 27343.8 |
| transcriptional regulator, arac family | SAMN05444679_114113 | Not Available | Positive | 3990734 - 3991672 | 35563.4 |
| xylulokinase | SAMN05444679_114114 | Not Available | Positive | 3991683 - 3993179 | 52623.1 |
| hypothetical protein | SAMN05444679_114115 | Not Available | Negative | 3993469 - 3993792 | 11409.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
