Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Comamonadaceae
Genus
Variovorax
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Comamonadaceae |
| Genus | Variovorax |
| Species | Variovorax sp. CF079 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1129990 bp
Thymine Count
1131182 bp
Guanine Count
2291305 bp
Cytosine Count
2293904 bp
Genome Length
6847006 bp
Protein-coding Genes
6686 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative hydroxymethylpyrimidine transporter cytx | SAMN05444679_11496 | Not Available | Positive | 3977089 - 3978408 | 46372.3 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | SAMN05444679_11497 | Not Available | Negative | 3978353 - 3979198 | 28847.9 |
| glycine oxidase | SAMN05444679_11498 | Not Available | Positive | 3979227 - 3980339 | 39440.1 |
| sulfur carrier protein | SAMN05444679_11499 | Not Available | Positive | 3980336 - 3980533 | 6906.24 |
| thiazole-phosphate synthase | SAMN05444679_114100 | Not Available | Positive | 3980543 - 3981361 | 29115.9 |
| thiamine-phosphate diphosphorylase | SAMN05444679_114101 | Not Available | Positive | 3981369 - 3982295 | 32472.7 |
| Trna-asn | Not Available | Not Available | Positive | 3982363 - 3982438 | Not Available |
| hypothetical protein | SAMN05444679_114103 | Not Available | Negative | 3982805 - 3983158 | 12313.9 |
| protein of unknown function | SAMN05444679_114104 | Not Available | Positive | 3983424 - 3983600 | 6387.42 |
| hypothetical protein | SAMN05444679_114105 | Not Available | Positive | 3983632 - 3983868 | 8983.81 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
